EMBOSS explorer


Find siRNA duplexes in mRNA (read the manual)

Unshaded fields are optional and can safely be ignored. (hide optional fields)

Input section

Select an input sequence. Use one of the following three fields:

  1. To access a sequence from a database, enter the USA here:
  2. To upload a sequence from your local computer, select it here:
  3. To enter the sequence data manually, type here:
Sequence input options
Select probes for Pol III expression vectors?
Select only regions that start with AA?
Select only regions that end with TT?
Allow regions with 4 repeats of a base?
Output section
Output report format
Output sequence format
Show the two bases before the output 21 base probe?
Run section
Email address: If you are submitting a long job and would like to be informed by email when it finishes, enter your email address here.