EMBOSS explorer


Restriction site maximum likelihood method (read the manual)

Unshaded fields are optional and can safely be ignored. (hide optional fields)

Input section
Select an input file::
Phylip weights file (optional):
Phylip tree file (optional):
Additional section
Number of times to randomise
Random number seed between 1 and 32767 (must be odd)
Species number to use as outgroup
All sites detected?
Use lengths from user trees?
Site length
Global rearrangements?
Speedier but rougher analysis?
Output section
Write out trees to tree file?
Print data at start of run?
Print indications of progress of run?
Print out tree?
Run section
Email address: If you are submitting a long job and would like to be informed by email when it finishes, enter your email address here.