EMBOSS explorer


Penny algorithm Dollo or polymorphism (read the manual)

Unshaded fields are optional and can safely be ignored. (hide optional fields)

Input section
Phylip character discrete states file:
Weights file:
Ancestral states file:
Additional section
Use threshold parsimony?
Threshold value
How many groups of trees
How often to report, in trees
Branch and bound is simple?
Parsimony method
Output section
Write out trees to tree file?
Print data at start of run?
Print indications of progress of run?
Print out tree?
Print states at all nodes of tree?
Print out steps in each character?
Run section
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