EMBOSS explorer


Add sequence records to a DCF file. (read the manual)

Unshaded fields are optional and can safely be ignored. (hide optional fields)

Input section
Domain classification file:

inappropriate datatype directory

Retrieve swissprot sequence.?
Swissprot:pdb equivalence table file (optional):

Residue substitution matrix. Use one of the following two fields:

  1. To access a standard EMBOSS data file, enter the name here: (default is EBLOSUM62 for protein, EDNAFULL for nucleic)
  2. To upload a data file from your local computer, select it here:
Required section
Additional section
Gap insertion penalty. (default is 10.0 for any sequence)
Gap extension penalty. (default is 0.5 for any sequence)
Output section
Run section
Email address: If you are submitting a long job and would like to be informed by email when it finishes, enter your email address here.