EMBOSS explorer


Remove redundant domains from a DCF file. (read the manual)

Unshaded fields are optional and can safely be ignored. (hide optional fields)

Input section
Domain classification file:

Residue substitution matrix. Use one of the following two fields:

  1. To access a standard EMBOSS data file, enter the name here: (default is EBLOSUM62 for protein, EDNAFULL for nucleic)
  2. To upload a data file from your local computer, select it here:
Write redundant domains to separate file.?
Required section
Select number.
Select number.
The % sequence identity redundancy threshold.
The % sequence identity redundancy threshold (lower limit)
The % sequence identity redundancy threshold (upper limit).
Additional section
Gap insertion penalty (default is 10.0 for any sequence)
Gap extension penalty (default is 0.5 for any sequence)
Advanced section
Output section
Run section
Email address: If you are submitting a long job and would like to be informed by email when it finishes, enter your email address here.